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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805063.1_cds_XP_016492018.1_8225
CDS Infomation

[gene=LOC107811571] [db_xref=GeneID:107811571] [protein=nicalin-1-like] [protein_id=XP_016492018.1] [location=join(73332..73611,75238..75401,76099..76202,76993..77059,78268..78360,78442..78606,78693..78836,78935..79012,80034..80146,80237..80297,81627..81794,83309..83410,84011..84100,84262..84324)] [gbkey=CDS]
Sequence

ATGGCGAATTCTCAGAGAAGGCTGGCGGCCGTATTGGATCCCGTCTACTATCCAGTAGTC
GCATTGGTATTAGTCCTCGTCGCGTGCGTCGACCTGTGCGATGCCATCACAGTCGTCGAC
GTTTACCGGCTCGTTCAGTACGATCTTTCCGGCGTCCCATTCGGATCTCGCCTCGCTACT
CTCAATCACCACGCCGGTTCTTCGCTCTTCGCTTCTGCCGATCTCTCTCGCACTGTACTC
ATGCTTCCCGTTCGTGAGTTGAACCTCGATCTCATTAAAGAATATATTGGACAAGGGAAT
CTGTTAGGGGGCTTACTGCTTTTACTCCCTCCTAAATTTAGTCCAGAAAAAGTAGACGCT
GCAGTTGGTGATGATGGTGATTTTGACCTTTTGAGGAATAAAGTGTCTGAGCTGGAGCGG
TTGCTTATACATGCTAACATCCCTTATCCTGTATATTTTGCTTTTGAGGATGATAACATC
AGTGCTGTACTAGCTGAAGTCAAGAGAAATGATGCTAGTGGTCAACCTGCAACTGCTACT
ACAGGCGGATACAAGCTTGTTGTTGTTGCCTCAGATCCTAAGAAAATTGCATCCCCCACC
ATTGCAAATATTCAGGGATGGTTACCAGGACTAAAACTTGACGGAGACTCAAGCCAACTC
CCTACTATTGCCATAGTTGCTTCATACGACACCTTTGGGGCTGCACCGGCATTGTCAGTT
GGAAGTGATAGCAATGGAAGTGGTGTTGTGGCACTTCTTGAGATAGCTAGGCTGTTCTCG
GTTCTGTATTCAAATCCTAAAACAAGAGGTAGATATAATTTACTTTTTGGATTGACATCT
GGTGGGCCCTATAACTACAACGGAACTCAGAAGTGGCTTCGAAGTTTTGACCAACGTCTA
CGTGAGAGTATAGACTATGCCATTTGCTTGAATAGTCTTGGGTCCTTGGGCAGCAATGAG
TTACATCTTCATGTTTCAAAACCTCCCGAAAACGCATACATTCAACAAATATTTCAGGGT
TTCTCTCGTGTAGCAGAAGAATCGGGGCTTCAAGTTGGTCTTAAGCACAAGAAAATAAAC
ATCTCCAGTCCTCGAGTAGCCTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCA
GCAACAATTTCTGAGCTTTCTACTGCACCTGAATTGCTAGAAAGCACTGGAGGTCTGTCT
GATAACAGACATTCTGTGAGTGAAGCCTCAATTATTCAAAGTGTCAAGCTTGTTGCTGAA
AGTCTAGCAAGACACATATACAGCCAGGAAGGGAAGAGCACAAATATATTTGCCGACAAT
AGTAGTTTAGCTGTTAATCCTTCCTATGTACGGTCTTGGCTGGACCTTCTGTCTAGGACT
TCTCGAGTGGCACCTTTTCTTCCAAAGAATGACCCACTCATCATGGCACTTCAAAAGGAA
TTAGCTGATCATACTGCTGAGGTGAATATACAGCATGAGACTCTAGATGGAATGTTTACT
TTTTACGACTCAATTAGTGGCAGGTTACATATATATCAGGTTGCCAGCGTAACATTCGAT
TTGCTTTTGCTGTTAGTTCTCGGATCATACTTGATTACACTTTTCAGTTTTCTTGTCATC
ACCACCAGGGGTCTTGACGATCTTATCAGTCTGTTCCGCCGTCCTCCATCTCGGAAAGTG
AAAACTGCTTGA

Peptide Sequence

PEP ID

XP_016492018.1
PEP Infomation

PREDICTED: nicalin-1-like [Nicotiana tabacum]
Sequence

MANSQRRLAAVLDPVYYPVVALVLVLVACVDLCDAITVVDVYRLVQYDLSGVPFGSRLAT
LNHHAGSSLFASADLSRTVLMLPVRELNLDLIKEYIGQGNLLGGLLLLLPPKFSPEKVDA
AVGDDGDFDLLRNKVSELERLLIHANIPYPVYFAFEDDNISAVLAEVKRNDASGQPATAT
TGGYKLVVVASDPKKIASPTIANIQGWLPGLKLDGDSSQLPTIAIVASYDTFGAAPALSV
GSDSNGSGVVALLEIARLFSVLYSNPKTRGRYNLLFGLTSGGPYNYNGTQKWLRSFDQRL
RESIDYAICLNSLGSLGSNELHLHVSKPPENAYIQQIFQGFSRVAEESGLQVGLKHKKIN
ISSPRVAWEHEQFSRLRVTAATISELSTAPELLESTGGLSDNRHSVSEASIIQSVKLVAE
SLARHIYSQEGKSTNIFADNSSLAVNPSYVRSWLDLLSRTSRVAPFLPKNDPLIMALQKE
LADHTAEVNIQHETLDGMFTFYDSISGRLHIYQVASVTFDLLLLLVLGSYLITLFSFLVI
TTRGLDDLISLFRRPPSRKVKTA

Transcript Sequence

Gene sequence data has not been registered.